WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.12.1 Sequence Name  Y69A2AR.12.1
Length (nt)  1666   Chromosome Location  IV: 2568614-2572158
Chromosome . Primary Identifier  IV Chromosome Location . Start  2568614
Chromosome Location . End  2572158 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022083 Y69A2AR.12 Y69A2AR.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.12 Y69A2AR.12 1539   IV: 2568614-2568686

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y69A2AR.12.1 2568614 2572158 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115228   73   IV: 2568614-2568686 Caenorhabditis elegans
Exon115229   51   IV: 2569232-2569282 Caenorhabditis elegans
Exon115230   75   IV: 2569334-2569408 Caenorhabditis elegans
Exon115231   54   IV: 2569564-2569617 Caenorhabditis elegans
Exon115232   63   IV: 2569659-2569721 Caenorhabditis elegans
Exon115233   75   IV: 2569778-2569852 Caenorhabditis elegans
Exon115234   45   IV: 2570048-2570092 Caenorhabditis elegans
Exon115235   81   IV: 2570144-2570224 Caenorhabditis elegans
Exon115236   90   IV: 2570277-2570366 Caenorhabditis elegans
Exon115237   57   IV: 2570426-2570482 Caenorhabditis elegans
Exon115238   69   IV: 2570527-2570595 Caenorhabditis elegans
Exon115239   45   IV: 2570643-2570687 Caenorhabditis elegans
Exon115240   59   IV: 2570740-2570798 Caenorhabditis elegans
Exon115241   105   IV: 2570956-2571060 Caenorhabditis elegans
Exon115242   216   IV: 2571291-2571506 Caenorhabditis elegans
Exon115243   204   IV: 2571561-2571764 Caenorhabditis elegans
Exon115244   304   IV: 2571855-2572158 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y69A2AR.12.1 2568614 2572158 1

1 Sequence

Length
1666

1 Sequence Ontology Term

Identifier Name Description
transcript