WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.25.1 Sequence Name  Y69A2AR.25.1
Length (nt)  1068   Chromosome Location  IV: 2565787-2568367
Chromosome . Primary Identifier  IV Chromosome Location . Start  2565787
Chromosome Location . End  2568367 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.25.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022096 Y69A2AR.25 Y69A2AR.25 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.25 Y69A2AR.25 1014   IV: 2565841-2565972

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.25.1 2565787 2568367 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115235   186   IV: 2565787-2565972 Caenorhabditis elegans
Exon115236   59   IV: 2566138-2566196 Caenorhabditis elegans
Exon115237   45   IV: 2566249-2566293 Caenorhabditis elegans
Exon115238   69   IV: 2566341-2566409 Caenorhabditis elegans
Exon115239   57   IV: 2566454-2566510 Caenorhabditis elegans
Exon115240   90   IV: 2566570-2566659 Caenorhabditis elegans
Exon115241   81   IV: 2566712-2566792 Caenorhabditis elegans
Exon115242   45   IV: 2566844-2566888 Caenorhabditis elegans
Exon115243   75   IV: 2567084-2567158 Caenorhabditis elegans
Exon115244   63   IV: 2567215-2567277 Caenorhabditis elegans
Exon115245   54   IV: 2567319-2567372 Caenorhabditis elegans
Exon115246   75   IV: 2567528-2567602 Caenorhabditis elegans
Exon115247   51   IV: 2567654-2567704 Caenorhabditis elegans
Exon115248   118   IV: 2568250-2568367 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.25.1 2565787 2568367 -1

1 Sequence

Length
1068

1 Sequence Ontology Term

Identifier Name Description
transcript