WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.7a.1 Sequence Name  Y69A2AR.7a.1
Length (nt)  1382   Chromosome Location  IV: 2601141-2607464
Chromosome . Primary Identifier  IV Chromosome Location . Start  2601141
Chromosome Location . End  2607464 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022078 epg-9 Y69A2AR.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.7a Y69A2AR.7a 783   IV: 2601150-2601179

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.7a.1 2601141 2607464 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115288   39   IV: 2601141-2601179 Caenorhabditis elegans
Exon115289   78   IV: 2601312-2601389 Caenorhabditis elegans
Exon115290   84   IV: 2603214-2603297 Caenorhabditis elegans
Exon115292   307   IV: 2604831-2605137 Caenorhabditis elegans
Exon115295   216   IV: 2605884-2606099 Caenorhabditis elegans
Exon115300   658   IV: 2606807-2607464 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.7a.1 2601141 2607464 1

1 Sequence

Length
1382

1 Sequence Ontology Term

Identifier Name Description
transcript