WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y69A2AR.4 Sequence Name  Y69A2AR.4
Length (nt)  1683   Chromosome Location  IV: 2619891-2619998
Chromosome . Primary Identifier  IV Chromosome Location . Start  2619891
Chromosome Location . End  2619998
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46127 SMF-3 63.2 560 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00002419
WBRNAi00058053
WBRNAi00021314
WBRNAi00059918
WBRNAi00059919

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y69A2AR.4 2619891 2619998 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004878 smf-3 Y69A2AR.4 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y69A2AR.4 2619891 2619998 1
CDS:Y69A2AR.4 2620593 2620942 1
CDS:Y69A2AR.4 2621462 2621624 1
CDS:Y69A2AR.4 2621688 2621819 1
CDS:Y69A2AR.4 2622433 2622591 1
CDS:Y69A2AR.4 2623089 2623310 1
CDS:Y69A2AR.4 2623857 2624000 1
CDS:Y69A2AR.4 2624053 2624135 1
CDS:Y69A2AR.4 2624610 2624769 1
CDS:Y69A2AR.4 2624831 2624878 1
CDS:Y69A2AR.4 2625252 2625365 1

1 Sequence

Length
1683

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y69A2AR.4.1 Y69A2AR.4.1 1935   IV: 2618869-2625503
Transcript:Y69A2AR.4.2 Y69A2AR.4.2 1842   IV: 2619870-2625503