WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.2c.1 Sequence Name  Y69A2AR.2c.1
Length (nt)  600   Chromosome Location  IV: 2642987-2643967
Chromosome . Primary Identifier  IV Chromosome Location . Start  2642987
Chromosome Location . End  2643967 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004367 ric-8 Y69A2AR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.2c Y69A2AR.2c 600   IV: 2642987-2643124

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.2c.1 2642987 2643967 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115444   138   IV: 2642987-2643124 Caenorhabditis elegans
Exon115448   102   IV: 2643174-2643275 Caenorhabditis elegans
Exon115451   85   IV: 2643361-2643445 Caenorhabditis elegans
Exon115456   70   IV: 2643504-2643573 Caenorhabditis elegans
Exon115463   205   IV: 2643763-2643967 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.2c.1 2642987 2643967 1

1 Sequence

Length
600

1 Sequence Ontology Term

Identifier Name Description
transcript