WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.31.1 Sequence Name  Y69A2AR.31.1
Length (nt)  3347   Chromosome Location  IV: 2650383-2664003
Chromosome . Primary Identifier  IV Chromosome Location . Start  2650383
Chromosome Location . End  2664003 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.31.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022100 gfrl-1 Y69A2AR.31 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.31 Y69A2AR.31 3201   IV: 2650492-2650620

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.31.1 2650383 2664003 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115482   238   IV: 2650383-2650620 Caenorhabditis elegans
Exon115485   96   IV: 2651114-2651209 Caenorhabditis elegans
Exon115486   395   IV: 2651860-2652254 Caenorhabditis elegans
Exon115487   124   IV: 2652818-2652941 Caenorhabditis elegans
Exon115488   612   IV: 2653390-2654001 Caenorhabditis elegans
Exon115490   232   IV: 2654683-2654914 Caenorhabditis elegans
Exon115493   194   IV: 2655407-2655600 Caenorhabditis elegans
Exon115494   221   IV: 2657715-2657935 Caenorhabditis elegans
Exon115496   312   IV: 2659303-2659614 Caenorhabditis elegans
Exon115497   132   IV: 2660108-2660239 Caenorhabditis elegans
Exon115498   273   IV: 2661021-2661293 Caenorhabditis elegans
Exon115499   128   IV: 2662637-2662764 Caenorhabditis elegans
Exon115500   100   IV: 2662834-2662933 Caenorhabditis elegans
Exon115501   96   IV: 2663284-2663379 Caenorhabditis elegans
Exon115502   114   IV: 2663433-2663546 Caenorhabditis elegans
Exon115503   80   IV: 2663924-2664003 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.31.1 2650383 2664003 -1

1 Sequence

Length
3347

1 Sequence Ontology Term

Identifier Name Description
transcript