WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:Y69A2AR.1d Sequence Name  Y69A2AR.1d
Length (nt)  1728   Chromosome Location  IV: 2667065-2672127
Chromosome . Primary Identifier  IV Chromosome Location . Start  2667065
Chromosome Location . End  2672127 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.1d

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022074 Y69A2AR.1 Y69A2AR.1 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y69A2AR.1d 2667065 2672127 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115508   24   IV: 2667065-2667088 Caenorhabditis elegans
Exon115513   111   IV: 2667139-2667249 Caenorhabditis elegans
Exon115518   138   IV: 2667365-2667502 Caenorhabditis elegans
Exon115521   77   IV: 2667561-2667637 Caenorhabditis elegans
Exon115525   118   IV: 2667741-2667858 Caenorhabditis elegans
Exon115529   72   IV: 2668821-2668892 Caenorhabditis elegans
Exon115536   226   IV: 2668936-2669161 Caenorhabditis elegans
Exon115542   178   IV: 2669269-2669446 Caenorhabditis elegans
Exon115548   568   IV: 2670089-2670656 Caenorhabditis elegans
Exon115562   131   IV: 2671848-2671978 Caenorhabditis elegans
Exon115568   85   IV: 2672043-2672127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y69A2AR.1d 2667065 2672127 1

1 Sequence

Length
1728

1 Sequence Ontology Term

Identifier Name Description
transcript