WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.1b.1 Sequence Name  Y69A2AR.1b.1
Length (nt)  1504   Chromosome Location  IV: 2667065-2672179
Chromosome . Primary Identifier  IV Chromosome Location . Start  2667065
Chromosome Location . End  2672179 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022074 Y69A2AR.1 Y69A2AR.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.1b Y69A2AR.1b 1452   IV: 2667065-2667088

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.1b.1 2667065 2672179 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115510   24   IV: 2667065-2667088 Caenorhabditis elegans
Exon115512   111   IV: 2667139-2667249 Caenorhabditis elegans
Exon115517   138   IV: 2667365-2667502 Caenorhabditis elegans
Exon115520   77   IV: 2667561-2667637 Caenorhabditis elegans
Exon115524   118   IV: 2667741-2667858 Caenorhabditis elegans
Exon115528   72   IV: 2668821-2668892 Caenorhabditis elegans
Exon115534   226   IV: 2668936-2669161 Caenorhabditis elegans
Exon115540   178   IV: 2669269-2669446 Caenorhabditis elegans
Exon115546   109   IV: 2670089-2670197 Caenorhabditis elegans
Exon115553   183   IV: 2670474-2670656 Caenorhabditis elegans
Exon115558   131   IV: 2671848-2671978 Caenorhabditis elegans
Exon115571   137   IV: 2672043-2672179 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.1b.1 2667065 2672179 1

1 Sequence

Length
1504

1 Sequence Ontology Term

Identifier Name Description
transcript