WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.1g.1 Sequence Name  Y69A2AR.1g.1
Length (nt)  942   Chromosome Location  IV: 2668863-2672127
Chromosome . Primary Identifier  IV Chromosome Location . Start  2668863
Chromosome Location . End  2672127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022074 Y69A2AR.1 Y69A2AR.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.1g Y69A2AR.1g 942   IV: 2668863-2668892

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.1g.1 2668863 2672127 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115531   30   IV: 2668863-2668892 Caenorhabditis elegans
Exon115535   226   IV: 2668936-2669161 Caenorhabditis elegans
Exon115541   178   IV: 2669269-2669446 Caenorhabditis elegans
Exon115547   109   IV: 2670089-2670197 Caenorhabditis elegans
Exon115554   183   IV: 2670474-2670656 Caenorhabditis elegans
Exon115559   131   IV: 2671848-2671978 Caenorhabditis elegans
Exon115565   85   IV: 2672043-2672127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.1g.1 2668863 2672127 1

1 Sequence

Length
942

1 Sequence Ontology Term

Identifier Name Description
transcript