WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y94H6A.5a.1 Sequence Name  Y94H6A.5a.1
Length (nt)  2603   Chromosome Location  IV: 2688913-2703977
Chromosome . Primary Identifier  IV Chromosome Location . Start  2688913
Chromosome Location . End  2703977 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y94H6A.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022378 Y94H6A.5 Y94H6A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y94H6A.5a Y94H6A.5a 2478   IV: 2689031-2689240

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y94H6A.5a.1 2688913 2703977 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115558   328   IV: 2688913-2689240 Caenorhabditis elegans
Exon115561   209   IV: 2690515-2690723 Caenorhabditis elegans
Exon115562   235   IV: 2691651-2691885 Caenorhabditis elegans
Exon115563   333   IV: 2693276-2693608 Caenorhabditis elegans
Exon115564   103   IV: 2694406-2694508 Caenorhabditis elegans
Exon115565   101   IV: 2695724-2695824 Caenorhabditis elegans
Exon115566   92   IV: 2695887-2695978 Caenorhabditis elegans
Exon115567   187   IV: 2697318-2697504 Caenorhabditis elegans
Exon115568   232   IV: 2698478-2698709 Caenorhabditis elegans
Exon115569   100   IV: 2699762-2699861 Caenorhabditis elegans
Exon115570   109   IV: 2700763-2700871 Caenorhabditis elegans
Exon115571   130   IV: 2701821-2701950 Caenorhabditis elegans
Exon115573   92   IV: 2702964-2703055 Caenorhabditis elegans
Exon115574   192   IV: 2703310-2703501 Caenorhabditis elegans
Exon115575   160   IV: 2703818-2703977 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y94H6A.5a.1 2688913 2703977 -1

1 Sequence

Length
2603

1 Sequence Ontology Term

Identifier Name Description
transcript