WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.10b.2 Sequence Name  Y54G2A.10b.2
Length (nt)  394   Chromosome Location  IV: 2800347-2800978
Chromosome . Primary Identifier  IV Chromosome Location . Start  2800347
Chromosome Location . End  2800978 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.10b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021875 Y54G2A.10 Y54G2A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.10b Y54G2A.10b 192   IV: 2800522-2800611

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54G2A.10b.2 2800347 2800978 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115692   265   IV: 2800347-2800611 Caenorhabditis elegans
Exon115695   129   IV: 2800850-2800978 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54G2A.10b.2 2800347 2800978 1

1 Sequence

Length
394

1 Sequence Ontology Term

Identifier Name Description
transcript