WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54G2A.2c Sequence Name  Y54G2A.2c
Length (nt)  885   Chromosome Location  IV: 2793429-2793486
Chromosome . Primary Identifier  IV Chromosome Location . Start  2793429
Chromosome Location . End  2793486
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48868 ATLN-1, isoform c 32.7 294 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00085582
WBRNAi00057450
WBRNAi00112386
WBRNAi00112387
WBRNAi00112388

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54G2A.2c 2793429 2793486 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021868 atln-1 Y54G2A.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54G2A.2c 2793429 2793486 1
CDS:Y54G2A.2c 2793757 2793906 1
CDS:Y54G2A.2c 2794478 2794743 1
CDS:Y54G2A.2c 2795654 2795893 1
CDS:Y54G2A.2c 2796430 2796600 1

1 Sequence

Length
885

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54G2A.2c.1 Y54G2A.2c.1 885   IV: 2793429-2796600