WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54G2A.39a Sequence Name  Y54G2A.39a
Length (nt)  537   Chromosome Location  IV: 2823806-2823897
Chromosome . Primary Identifier  IV Chromosome Location . Start  2823806
Chromosome Location . End  2823897
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.39a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37574 CLEC-80, isoform a 20.0 178 Caenorhabditis elegans
 

Other

0 RNAi

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54G2A.39a 2823806 2823897 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00043062 clec-80 Y54G2A.39 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54G2A.39a 2823806 2823897 1
CDS:Y54G2A.39a 2824182 2824306 1
CDS:Y54G2A.39a 2824941 2825260 1

1 Sequence

Length
537

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54G2A.39a.1 Y54G2A.39a.1 935   IV: 2823746-2825647