WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54G2A.8a Sequence Name  Y54G2A.8a
Length (nt)  1395   Chromosome Location  IV: 2835680-2835771
Chromosome . Primary Identifier  IV Chromosome Location . Start  2835680
Chromosome Location . End  2835771
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31655 CLEC-82, isoform a 51.6 464 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00057473

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y54G2A.8a 2835680 2835771 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021873 clec-82 Y54G2A.8 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y54G2A.8a 2835680 2835771 1
CDS:Y54G2A.8a 2835818 2835945 1
CDS:Y54G2A.8a 2836179 2836439 1
CDS:Y54G2A.8a 2836489 2836678 1
CDS:Y54G2A.8a 2836725 2836818 1
CDS:Y54G2A.8a 2837095 2837334 1
CDS:Y54G2A.8a 2837385 2837532 1
CDS:Y54G2A.8a 2837702 2837787 1
CDS:Y54G2A.8a 2837839 2837960 1
CDS:Y54G2A.8a 2838482 2838515 1

1 Sequence

Length
1395

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54G2A.8a.1 Y54G2A.8a.1 1619   IV: 2835664-2838723