WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.14.2 Sequence Name  Y54G2A.14.2
Length (nt)  922   Chromosome Location  IV: 2839371-2841472
Chromosome . Primary Identifier  IV Chromosome Location . Start  2839371
Chromosome Location . End  2841472 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.14.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021879 clec-83 Y54G2A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.14 Y54G2A.14 714   IV: 2839445-2839704

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54G2A.14.2 2839371 2841472 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115828   334   IV: 2839371-2839704 Caenorhabditis elegans
Exon115831   243   IV: 2840008-2840250 Caenorhabditis elegans
Exon115833   116   IV: 2840430-2840545 Caenorhabditis elegans
Exon115835   95   IV: 2840591-2840685 Caenorhabditis elegans
Exon115836   134   IV: 2841339-2841472 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54G2A.14.2 2839371 2841472 -1

1 Sequence

Length
922

1 Sequence Ontology Term

Identifier Name Description
transcript