WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.49b.1 Sequence Name  Y54G2A.49b.1
Length (nt)  516   Chromosome Location  IV: 2851691-2853264
Chromosome . Primary Identifier  IV Chromosome Location . Start  2851691
Chromosome Location . End  2853264 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.49b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044492 Y54G2A.49 Y54G2A.49 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.49b Y54G2A.49b 456   IV: 2851748-2851867

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54G2A.49b.1 2851691 2853264 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115837   177   IV: 2851691-2851867 Caenorhabditis elegans
Exon115840   284   IV: 2852674-2852957 Caenorhabditis elegans
Exon115841   55   IV: 2853210-2853264 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54G2A.49b.1 2851691 2853264 -1

1 Sequence

Length
516

1 Sequence Ontology Term

Identifier Name Description
transcript