WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.17c.1 Sequence Name  Y54G2A.17c.1
Length (nt)  717   Chromosome Location  IV: 2881587-2882303
Chromosome . Primary Identifier  IV Chromosome Location . Start  2881587
Chromosome Location . End  2882303 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.17c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021882 nprt-1 Y54G2A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.17c Y54G2A.17c 717   IV: 2881587-2882303

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54G2A.17c.1 2881587 2882303 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

1 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115880   717   IV: 2881587-2882303 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54G2A.17c.1 2881587 2882303 -1

1 Sequence

Length
717

1 Sequence Ontology Term

Identifier Name Description
transcript