WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.18.1 Sequence Name  Y54G2A.18.1
Length (nt)  774   Chromosome Location  IV: 2891560-2892495
Chromosome . Primary Identifier  IV Chromosome Location . Start  2891560
Chromosome Location . End  2892495 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.18.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021883 Y54G2A.18 Y54G2A.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.18 Y54G2A.18 642   IV: 2891685-2891873

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54G2A.18.1 2891560 2892495 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115902   314   IV: 2891560-2891873 Caenorhabditis elegans
Exon115903   361   IV: 2891928-2892288 Caenorhabditis elegans
Exon115904   99   IV: 2892397-2892495 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54G2A.18.1 2891560 2892495 -1

1 Sequence

Length
774

1 Sequence Ontology Term

Identifier Name Description
transcript