WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.36.4 Sequence Name  Y54G2A.36.4
Length (nt)  765   Chromosome Location  IV: 2897694-2901650
Chromosome . Primary Identifier  IV Chromosome Location . Start  2897694
Chromosome Location . End  2901650 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.36.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021898 Y54G2A.36 Y54G2A.36 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.36 Y54G2A.36 387   IV: 2901193-2901365

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54G2A.36.4 2897694 2901650 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115912   109   IV: 2897694-2897802 Caenorhabditis elegans
Exon115928   199   IV: 2900899-2901097 Caenorhabditis elegans
Exon115931   222   IV: 2901144-2901365 Caenorhabditis elegans
Exon115934   235   IV: 2901416-2901650 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54G2A.36.4 2897694 2901650 1

1 Sequence

Length
765

1 Sequence Ontology Term

Identifier Name Description
transcript