WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D8C.5a.1 Sequence Name  Y67D8C.5a.1
Length (nt)  13147   Chromosome Location  IV: 3032713-3050104
Chromosome . Primary Identifier  IV Chromosome Location . Start  3032713
Chromosome Location . End  3050104 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8C.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022069 eel-1 Y67D8C.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D8C.5a Y67D8C.5a 12534   IV: 3033193-3033295

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.5a.1 3032713 3050104 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116127   583   IV: 3032713-3033295 Caenorhabditis elegans
Exon116135   107   IV: 3033922-3034028 Caenorhabditis elegans
Exon116143   892   IV: 3034088-3034979 Caenorhabditis elegans
Exon116151   1652   IV: 3035031-3036682 Caenorhabditis elegans
Exon116159   260   IV: 3037227-3037486 Caenorhabditis elegans
Exon116167   1336   IV: 3037894-3039229 Caenorhabditis elegans
Exon116175   397   IV: 3039695-3040091 Caenorhabditis elegans
Exon116183   2322   IV: 3040498-3042819 Caenorhabditis elegans
Exon116191   1037   IV: 3042876-3043912 Caenorhabditis elegans
Exon116199   1563   IV: 3044133-3045695 Caenorhabditis elegans
Exon116207   873   IV: 3045755-3046627 Caenorhabditis elegans
Exon116215   585   IV: 3046686-3047270 Caenorhabditis elegans
Exon116223   768   IV: 3048190-3048957 Caenorhabditis elegans
Exon116231   411   IV: 3049283-3049693 Caenorhabditis elegans
Exon116246   361   IV: 3049744-3050104 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.5a.1 3032713 3050104 -1

1 Sequence

Length
13147

1 Sequence Ontology Term

Identifier Name Description
transcript