WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D8C.5b.1 Sequence Name  Y67D8C.5b.1
Length (nt)  12540   Chromosome Location  IV: 3033193-3049971
Chromosome . Primary Identifier  IV Chromosome Location . Start  3033193
Chromosome Location . End  3049971 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8C.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022069 eel-1 Y67D8C.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D8C.5b Y67D8C.5b 12540   IV: 3033193-3033295

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.5b.1 3033193 3049971 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116131   103   IV: 3033193-3033295 Caenorhabditis elegans
Exon116136   107   IV: 3033922-3034028 Caenorhabditis elegans
Exon116144   892   IV: 3034088-3034979 Caenorhabditis elegans
Exon116152   1652   IV: 3035031-3036682 Caenorhabditis elegans
Exon116160   260   IV: 3037227-3037486 Caenorhabditis elegans
Exon116168   1336   IV: 3037894-3039229 Caenorhabditis elegans
Exon116176   397   IV: 3039695-3040091 Caenorhabditis elegans
Exon116184   2322   IV: 3040498-3042819 Caenorhabditis elegans
Exon116192   1037   IV: 3042876-3043912 Caenorhabditis elegans
Exon116200   1563   IV: 3044133-3045695 Caenorhabditis elegans
Exon116208   873   IV: 3045755-3046627 Caenorhabditis elegans
Exon116216   585   IV: 3046686-3047270 Caenorhabditis elegans
Exon116227   774   IV: 3048190-3048963 Caenorhabditis elegans
Exon116232   411   IV: 3049283-3049693 Caenorhabditis elegans
Exon116239   228   IV: 3049744-3049971 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.5b.1 3033193 3049971 -1

1 Sequence

Length
12540

1 Sequence Ontology Term

Identifier Name Description
transcript