WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54G2A.1 Sequence Name  Y54G2A.1
Length (nt)  522   Chromosome Location  IV: 3019740-3019808
Chromosome . Primary Identifier  IV Chromosome Location . Start  3019740
Chromosome Location . End  3019808
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26703 LIN-22 19.5 173 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00057436

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54G2A.1 3019740 3019808 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003008 lin-22 Y54G2A.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54G2A.1 3019740 3019808 1
CDS:Y54G2A.1 3019906 3019998 1
CDS:Y54G2A.1 3021856 3022215 1

1 Sequence

Length
522

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54G2A.1.1 Y54G2A.1.1 1613   IV: 3019738-3023304