WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54G2A.29 Sequence Name  Y54G2A.29
Length (nt)  1611   Chromosome Location  IV: 3023628-3023870
Chromosome . Primary Identifier  IV Chromosome Location . Start  3023628
Chromosome Location . End  3023870
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.29

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34416 NDNF-1 60.6 536 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00000260
WBRNAi00057462
WBRNAi00037491

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54G2A.29 3023628 3023870 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021893 ndnf-1 Y54G2A.29 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54G2A.29 3023628 3023870 -1
CDS:Y54G2A.29 3024553 3024682 -1
CDS:Y54G2A.29 3024732 3024869 -1
CDS:Y54G2A.29 3025892 3025992 -1
CDS:Y54G2A.29 3027215 3027846 -1
CDS:Y54G2A.29 3028445 3028579 -1
CDS:Y54G2A.29 3028635 3028732 -1
CDS:Y54G2A.29 3028799 3028932 -1

1 Sequence

Length
1611

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54G2A.29.1 Y54G2A.29.1 1846   IV: 3023403-3028942