WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D8C.5g.1 Sequence Name  Y67D8C.5g.1
Length (nt)  13028   Chromosome Location  IV: 3032717-3049971
Chromosome . Primary Identifier  IV Chromosome Location . Start  3032717
Chromosome Location . End  3049971 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8C.5g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022069 eel-1 Y67D8C.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D8C.5g Y67D8C.5g 12552   IV: 3033193-3033295

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.5g.1 3032717 3049971 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116183   579   IV: 3032717-3033295 Caenorhabditis elegans
Exon116196   107   IV: 3033922-3034028 Caenorhabditis elegans
Exon116204   901   IV: 3034088-3034988 Caenorhabditis elegans
Exon116212   1652   IV: 3035031-3036682 Caenorhabditis elegans
Exon116220   260   IV: 3037227-3037486 Caenorhabditis elegans
Exon116228   1336   IV: 3037894-3039229 Caenorhabditis elegans
Exon116236   406   IV: 3039695-3040100 Caenorhabditis elegans
Exon116244   2322   IV: 3040498-3042819 Caenorhabditis elegans
Exon116252   1037   IV: 3042876-3043912 Caenorhabditis elegans
Exon116260   1563   IV: 3044133-3045695 Caenorhabditis elegans
Exon116268   873   IV: 3045755-3046627 Caenorhabditis elegans
Exon116276   585   IV: 3046686-3047270 Caenorhabditis elegans
Exon116281   768   IV: 3048190-3048957 Caenorhabditis elegans
Exon116292   411   IV: 3049283-3049693 Caenorhabditis elegans
Exon116298   228   IV: 3049744-3049971 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.5g.1 3032717 3049971 -1

1 Sequence

Length
13028

1 Sequence Ontology Term

Identifier Name Description
transcript