WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D8C.3c.1 Sequence Name  Y67D8C.3c.1
Length (nt)  2403   Chromosome Location  IV: 3053728-3062038
Chromosome . Primary Identifier  IV Chromosome Location . Start  3053728
Chromosome Location . End  3062038 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8C.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022067 ivph-3 Y67D8C.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D8C.3c Y67D8C.3c 2307   IV: 3053730-3053903

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.3c.1 3053728 3062038 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116250   176   IV: 3053728-3053903 Caenorhabditis elegans
Exon116251   99   IV: 3054004-3054102 Caenorhabditis elegans
Exon116252   45   IV: 3055378-3055422 Caenorhabditis elegans
Exon116253   144   IV: 3055714-3055857 Caenorhabditis elegans
Exon116256   84   IV: 3056162-3056245 Caenorhabditis elegans
Exon116260   113   IV: 3056301-3056413 Caenorhabditis elegans
Exon116263   202   IV: 3057397-3057598 Caenorhabditis elegans
Exon116267   158   IV: 3057654-3057811 Caenorhabditis elegans
Exon116270   141   IV: 3058676-3058816 Caenorhabditis elegans
Exon116274   141   IV: 3059685-3059825 Caenorhabditis elegans
Exon116277   783   IV: 3059880-3060662 Caenorhabditis elegans
Exon116281   147   IV: 3061665-3061811 Caenorhabditis elegans
Exon116285   170   IV: 3061869-3062038 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.3c.1 3053728 3062038 1

1 Sequence

Length
2403

1 Sequence Ontology Term

Identifier Name Description
transcript