WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D8C.3a.1 Sequence Name  Y67D8C.3a.1
Length (nt)  2098   Chromosome Location  IV: 3055714-3062053
Chromosome . Primary Identifier  IV Chromosome Location . Start  3055714
Chromosome Location . End  3062053 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8C.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022067 ivph-3 Y67D8C.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D8C.3a Y67D8C.3a 1989   IV: 3055714-3055857

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.3a.1 3055714 3062053 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116254   144   IV: 3055714-3055857 Caenorhabditis elegans
Exon116255   84   IV: 3056162-3056245 Caenorhabditis elegans
Exon116258   113   IV: 3056301-3056413 Caenorhabditis elegans
Exon116261   202   IV: 3057397-3057598 Caenorhabditis elegans
Exon116265   158   IV: 3057654-3057811 Caenorhabditis elegans
Exon116268   141   IV: 3058676-3058816 Caenorhabditis elegans
Exon116272   141   IV: 3059685-3059825 Caenorhabditis elegans
Exon116275   783   IV: 3059880-3060662 Caenorhabditis elegans
Exon116279   147   IV: 3061665-3061811 Caenorhabditis elegans
Exon116286   185   IV: 3061869-3062053 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.3a.1 3055714 3062053 1

1 Sequence

Length
2098

1 Sequence Ontology Term

Identifier Name Description
transcript