WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D8C.9a.1 Sequence Name  Y67D8C.9a.1
Length (nt)  3526   Chromosome Location  IV: 3077473-3086923
Chromosome . Primary Identifier  IV Chromosome Location . Start  3077473
Chromosome Location . End  3086923 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8C.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022073 Y67D8C.9 Y67D8C.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D8C.9a Y67D8C.9a 3264   IV: 3077662-3077799

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.9a.1 3077473 3086923 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116300   327   IV: 3077473-3077799 Caenorhabditis elegans
Exon116301   171   IV: 3078751-3078921 Caenorhabditis elegans
Exon116303   156   IV: 3078965-3079120 Caenorhabditis elegans
Exon116305   111   IV: 3079505-3079615 Caenorhabditis elegans
Exon116307   669   IV: 3080059-3080727 Caenorhabditis elegans
Exon116309   112   IV: 3081565-3081676 Caenorhabditis elegans
Exon116311   108   IV: 3081731-3081838 Caenorhabditis elegans
Exon116313   468   IV: 3082482-3082949 Caenorhabditis elegans
Exon116315   82   IV: 3083046-3083127 Caenorhabditis elegans
Exon116318   838   IV: 3083805-3084642 Caenorhabditis elegans
Exon116320   168   IV: 3084951-3085118 Caenorhabditis elegans
Exon116328   146   IV: 3086562-3086707 Caenorhabditis elegans
Exon116330   170   IV: 3086754-3086923 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.9a.1 3077473 3086923 -1

1 Sequence

Length
3526

1 Sequence Ontology Term

Identifier Name Description
transcript