WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D8C.10c.1 Sequence Name  Y67D8C.10c.1
Length (nt)  4334   Chromosome Location  IV: 3103157-3133147
Chromosome . Primary Identifier  IV Chromosome Location . Start  3103157
Chromosome Location . End  3133147 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8C.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003153 mca-3 Y67D8C.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D8C.10c Y67D8C.10c 3414   IV: 3103860-3103906

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.10c.1 3103157 3133147 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116334   750   IV: 3103157-3103906 Caenorhabditis elegans
Exon116343   127   IV: 3105178-3105304 Caenorhabditis elegans
Exon116363   168   IV: 3116622-3116789 Caenorhabditis elegans
Exon116374   2060   IV: 3117597-3119656 Caenorhabditis elegans
Exon116385   126   IV: 3120846-3120971 Caenorhabditis elegans
Exon116396   51   IV: 3121631-3121681 Caenorhabditis elegans
Exon116408   109   IV: 3124030-3124138 Caenorhabditis elegans
Exon116420   392   IV: 3126125-3126516 Caenorhabditis elegans
Exon116430   82   IV: 3127905-3127986 Caenorhabditis elegans
Exon116440   199   IV: 3129340-3129538 Caenorhabditis elegans
Exon116448   57   IV: 3131317-3131373 Caenorhabditis elegans
Exon116458   59   IV: 3132217-3132275 Caenorhabditis elegans
Exon116463   154   IV: 3132994-3133147 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.10c.1 3103157 3133147 -1

1 Sequence

Length
4334

1 Sequence Ontology Term

Identifier Name Description
transcript