WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y67D8C.10a Sequence Name  Y67D8C.10a
Length (nt)  3483   Chromosome Location  IV: 3103860-3103906
Chromosome . Primary Identifier  IV Chromosome Location . Start  3103860
Chromosome Location . End  3103906
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8C.10a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28372 MCA-3, isoform a 126.9 1160 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00009413
WBRNAi00057995
WBRNAi00026914
WBRNAi00103078
WBRNAi00021260
WBRNAi00103079
WBRNAi00103077
WBRNAi00066558
WBRNAi00110940

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y67D8C.10a 3103860 3103906 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003153 mca-3 Y67D8C.10 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y67D8C.10a 3103860 3103906 -1
CDS:Y67D8C.10a 3105178 3105304 -1
CDS:Y67D8C.10a 3109983 3110051 -1
CDS:Y67D8C.10a 3116622 3116789 -1
CDS:Y67D8C.10a 3117597 3119656 -1
CDS:Y67D8C.10a 3120846 3120971 -1
CDS:Y67D8C.10a 3121631 3121681 -1
CDS:Y67D8C.10a 3124030 3124138 -1
CDS:Y67D8C.10a 3126125 3126516 -1
CDS:Y67D8C.10a 3127905 3127986 -1
CDS:Y67D8C.10a 3129340 3129538 -1
CDS:Y67D8C.10a 3131317 3131369 -1

1 Sequence

Length
3483

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y67D8C.10a.1 Y67D8C.10a.1 4405   IV: 3103157-3133149
Transcript:Y67D8C.10a.4 Y67D8C.10a.4 3709   IV: 3103651-3131386
Transcript:Y67D8C.10a.3 Y67D8C.10a.3 3757   IV: 3103651-3132277
Transcript:Y67D8C.10a.2 Y67D8C.10a.2 3878   IV: 3103651-3133116