WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D8C.10b.1 Sequence Name  Y67D8C.10b.1
Length (nt)  4601   Chromosome Location  IV: 3111374-3133149
Chromosome . Primary Identifier  IV Chromosome Location . Start  3111374
Chromosome Location . End  3133149 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8C.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003153 mca-3 Y67D8C.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D8C.10b Y67D8C.10b 3705   IV: 3112051-3112515

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.10b.1 3111374 3133149 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116352   1142   IV: 3111374-3112515 Caenorhabditis elegans
Exon116359   168   IV: 3116622-3116789 Caenorhabditis elegans
Exon116370   2060   IV: 3117597-3119656 Caenorhabditis elegans
Exon116381   126   IV: 3120846-3120971 Caenorhabditis elegans
Exon116392   51   IV: 3121631-3121681 Caenorhabditis elegans
Exon116404   109   IV: 3124030-3124138 Caenorhabditis elegans
Exon116416   392   IV: 3126125-3126516 Caenorhabditis elegans
Exon116426   82   IV: 3127905-3127986 Caenorhabditis elegans
Exon116436   199   IV: 3129340-3129538 Caenorhabditis elegans
Exon116445   57   IV: 3131317-3131373 Caenorhabditis elegans
Exon116456   59   IV: 3132217-3132275 Caenorhabditis elegans
Exon116465   156   IV: 3132994-3133149 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.10b.1 3111374 3133149 -1

1 Sequence

Length
4601

1 Sequence Ontology Term

Identifier Name Description
transcript