WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y67D8C.10b Sequence Name  Y67D8C.10b
Length (nt)  3705   Chromosome Location  IV: 3112051-3112515
Chromosome . Primary Identifier  IV Chromosome Location . Start  3112051
Chromosome Location . End  3112515
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8C.10b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28373 MCA-3, isoform b 134.7 1234 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00009413
WBRNAi00057995
WBRNAi00026914
WBRNAi00103078
WBRNAi00021260
WBRNAi00103079
WBRNAi00103077
WBRNAi00066558
WBRNAi00110940

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y67D8C.10b 3112051 3112515 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003153 mca-3 Y67D8C.10 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y67D8C.10b 3112051 3112515 -1
CDS:Y67D8C.10b 3116622 3116789 -1
CDS:Y67D8C.10b 3117597 3119656 -1
CDS:Y67D8C.10b 3120846 3120971 -1
CDS:Y67D8C.10b 3121631 3121681 -1
CDS:Y67D8C.10b 3124030 3124138 -1
CDS:Y67D8C.10b 3126125 3126516 -1
CDS:Y67D8C.10b 3127905 3127986 -1
CDS:Y67D8C.10b 3129340 3129538 -1
CDS:Y67D8C.10b 3131317 3131369 -1

1 Sequence

Length
3705

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y67D8C.10b.4 Y67D8C.10b.4 4388   IV: 3111374-3131375
Transcript:Y67D8C.10b.3 Y67D8C.10b.3 4451   IV: 3111374-3132281
Transcript:Y67D8C.10b.2 Y67D8C.10b.2 4509   IV: 3111374-3133147
Transcript:Y67D8C.10b.1 Y67D8C.10b.1 4601   IV: 3111374-3133149