WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23E1.1.1 Sequence Name  T23E1.1.1
Length (nt)  1903   Chromosome Location  IV: 3151361-3156062
Chromosome . Primary Identifier  IV Chromosome Location . Start  3151361
Chromosome Location . End  3156062 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23E1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020728 T23E1.1 T23E1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23E1.1 T23E1.1 1812   IV: 3151377-3151521

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23E1.1.1 3151361 3156062 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116483   161   IV: 3151361-3151521 Caenorhabditis elegans
Exon116484   97   IV: 3151575-3151671 Caenorhabditis elegans
Exon116485   111   IV: 3152350-3152460 Caenorhabditis elegans
Exon116486   82   IV: 3152724-3152805 Caenorhabditis elegans
Exon116487   264   IV: 3152853-3153116 Caenorhabditis elegans
Exon116488   219   IV: 3153228-3153446 Caenorhabditis elegans
Exon116489   227   IV: 3154553-3154779 Caenorhabditis elegans
Exon116490   126   IV: 3154834-3154959 Caenorhabditis elegans
Exon116491   189   IV: 3155002-3155190 Caenorhabditis elegans
Exon116492   111   IV: 3155483-3155593 Caenorhabditis elegans
Exon116493   76   IV: 3155650-3155725 Caenorhabditis elegans
Exon116494   113   IV: 3155777-3155889 Caenorhabditis elegans
Exon116495   127   IV: 3155936-3156062 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23E1.1.1 3151361 3156062 1

1 Sequence

Length
1903

1 Sequence Ontology Term

Identifier Name Description
transcript