WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M4.1b Sequence Name  M4.1b
Length (nt)  1737   Chromosome Location  IV: 3213772-3213840
Chromosome . Primary Identifier  IV Chromosome Location . Start  3213772
Chromosome Location . End  3213840
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M4.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48719 SLMP-1, isoform b 64.5 578 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00051027
WBRNAi00017255
WBRNAi00060421
WBRNAi00060422
WBRNAi00060423
WBRNAi00060424

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M4.1b 3213772 3213840 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019766 slmp-1 M4.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:M4.1b 3213772 3213840 1
CDS:M4.1b 3213896 3213982 1
CDS:M4.1b 3214036 3214234 1
CDS:M4.1b 3214507 3214681 1
CDS:M4.1b 3215117 3215230 1
CDS:M4.1b 3215678 3216081 1
CDS:M4.1b 3217061 3217638 1
CDS:M4.1b 3219315 3219425 1

1 Sequence

Length
1737

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M4.1b.1 M4.1b.1 2627   IV: 3213760-3220303