WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D8A.2a.1 Sequence Name  Y67D8A.2a.1
Length (nt)  3896   Chromosome Location  IV: 3222442-3252601
Chromosome . Primary Identifier  IV Chromosome Location . Start  3222442
Chromosome Location . End  3252601 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022059 Y67D8A.2 Y67D8A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D8A.2a Y67D8A.2a 3657   IV: 3222444-3222612

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y67D8A.2a.1 3222442 3252601 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116554   171   IV: 3222442-3222612 Caenorhabditis elegans
Exon116556   136   IV: 3223190-3223325 Caenorhabditis elegans
Exon116559   100   IV: 3223376-3223475 Caenorhabditis elegans
Exon116562   322   IV: 3224483-3224804 Caenorhabditis elegans
Exon116565   277   IV: 3225608-3225884 Caenorhabditis elegans
Exon116567   131   IV: 3229975-3230105 Caenorhabditis elegans
Exon116569   338   IV: 3230394-3230731 Caenorhabditis elegans
Exon116571   150   IV: 3231454-3231603 Caenorhabditis elegans
Exon116579   189   IV: 3235514-3235702 Caenorhabditis elegans
Exon116581   174   IV: 3236800-3236973 Caenorhabditis elegans
Exon116585   156   IV: 3238070-3238225 Caenorhabditis elegans
Exon116591   136   IV: 3239074-3239209 Caenorhabditis elegans
Exon116599   480   IV: 3239970-3240449 Caenorhabditis elegans
Exon116611   91   IV: 3243455-3243545 Caenorhabditis elegans
Exon116620   238   IV: 3245475-3245712 Caenorhabditis elegans
Exon116630   78   IV: 3247843-3247920 Caenorhabditis elegans
Exon116640   126   IV: 3247967-3248092 Caenorhabditis elegans
Exon116658   376   IV: 3251614-3251989 Caenorhabditis elegans
Exon116661   227   IV: 3252375-3252601 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y67D8A.2a.1 3222442 3252601 1

1 Sequence

Length
3896

1 Sequence Ontology Term

Identifier Name Description
transcript