WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T26C12.4.1 Sequence Name  T26C12.4.1
Length (nt)  3346   Chromosome Location  IV: 3282885-3289337
Chromosome . Primary Identifier  IV Chromosome Location . Start  3282885
Chromosome Location . End  3289337 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26C12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001548 gcy-23 T26C12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T26C12.4 T26C12.4 3222   IV: 3283009-3283467

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T26C12.4.1 3282885 3289337 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116687   583   IV: 3282885-3283467 Caenorhabditis elegans
Exon116689   118   IV: 3284130-3284247 Caenorhabditis elegans
Exon116690   216   IV: 3284295-3284510 Caenorhabditis elegans
Exon116691   1496   IV: 3285122-3286617 Caenorhabditis elegans
Exon116692   93   IV: 3287958-3288050 Caenorhabditis elegans
Exon116693   200   IV: 3288097-3288296 Caenorhabditis elegans
Exon116694   467   IV: 3288349-3288815 Caenorhabditis elegans
Exon116695   116   IV: 3288868-3288983 Caenorhabditis elegans
Exon116696   57   IV: 3289281-3289337 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T26C12.4.1 3282885 3289337 -1

1 Sequence

Length
3346

1 Sequence Ontology Term

Identifier Name Description
transcript