WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08E12.1.1 Sequence Name  W08E12.1.1
Length (nt)  1243   Chromosome Location  IV: 3311276-3313189
Chromosome . Primary Identifier  IV Chromosome Location . Start  3311276
Chromosome Location . End  3313189 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08E12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021082 zip-11 W08E12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08E12.1 W08E12.1 687   IV: 3311568-3311608

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W08E12.1.1 3311276 3313189 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116728   333   IV: 3311276-3311608 Caenorhabditis elegans
Exon116729   161   IV: 3312165-3312325 Caenorhabditis elegans
Exon116730   273   IV: 3312392-3312664 Caenorhabditis elegans
Exon116731   476   IV: 3312714-3313189 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W08E12.1.1 3311276 3313189 1

1 Sequence

Length
1243

1 Sequence Ontology Term

Identifier Name Description
transcript