WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42A6.6c.1 Sequence Name  F42A6.6c.1
Length (nt)  634   Chromosome Location  IV: 3334042-3336870
Chromosome . Primary Identifier  IV Chromosome Location . Start  3334042
Chromosome Location . End  3336870 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A6.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018328 F42A6.6 F42A6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42A6.6c F42A6.6c 576   IV: 3334084-3334245

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42A6.6c.1 3334042 3336870 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116761   204   IV: 3334042-3334245 Caenorhabditis elegans
Exon116768   153   IV: 3336021-3336173 Caenorhabditis elegans
Exon116770   95   IV: 3336546-3336640 Caenorhabditis elegans
Exon116775   182   IV: 3336689-3336870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42A6.6c.1 3334042 3336870 -1

1 Sequence

Length
634

1 Sequence Ontology Term

Identifier Name Description
transcript