WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42A6.6b.1 Sequence Name  F42A6.6b.1
Length (nt)  665   Chromosome Location  IV: 3334043-3336854
Chromosome . Primary Identifier  IV Chromosome Location . Start  3334043
Chromosome Location . End  3336854 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A6.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018328 F42A6.6 F42A6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42A6.6b F42A6.6b 624   IV: 3334084-3334245

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42A6.6b.1 3334043 3336854 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116762   203   IV: 3334043-3334245 Caenorhabditis elegans
Exon116767   153   IV: 3336021-3336173 Caenorhabditis elegans
Exon116772   309   IV: 3336546-3336854 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42A6.6b.1 3334043 3336854 -1

1 Sequence

Length
665

1 Sequence Ontology Term

Identifier Name Description
transcript