WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0546.4a Sequence Name  B0546.4a
Length (nt)  486   Chromosome Location  IV: 3383180-3383300
Chromosome . Primary Identifier  IV Chromosome Location . Start  3383180
Chromosome Location . End  3383300
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0546.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16795 B0546.4, isoform a 17.9 161 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00039184
WBRNAi00009849
WBRNAi00028202

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0546.4a 3383180 3383300 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015251 B0546.4 B0546.4 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0546.4a 3383180 3383300 -1
CDS:B0546.4a 3383660 3383790 -1
CDS:B0546.4a 3383834 3383955 -1
CDS:B0546.4a 3384005 3384116 -1

1 Sequence

Length
486

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0546.4a.1 B0546.4a.1 748   IV: 3382949-3384147