WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G12.11.1 Sequence Name  C09G12.11.1
Length (nt)  939   Chromosome Location  IV: 3482895-3484706
Chromosome . Primary Identifier  IV Chromosome Location . Start  3482895
Chromosome Location . End  3484706 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G12.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023463 srz-82 C09G12.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G12.11 C09G12.11 939   IV: 3482895-3483053

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G12.11.1 3482895 3484706 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117046   159   IV: 3482895-3483053 Caenorhabditis elegans
Exon117047   110   IV: 3483331-3483440 Caenorhabditis elegans
Exon117048   286   IV: 3483939-3484224 Caenorhabditis elegans
Exon117049   162   IV: 3484275-3484436 Caenorhabditis elegans
Exon117050   222   IV: 3484485-3484706 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G12.11.1 3482895 3484706 1

1 Sequence

Length
939

1 Sequence Ontology Term

Identifier Name Description
transcript