WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G12.10.1 Sequence Name  C09G12.10.1
Length (nt)  945   Chromosome Location  IV: 3504444-3506115
Chromosome . Primary Identifier  IV Chromosome Location . Start  3504444
Chromosome Location . End  3506115 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G12.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023462 srz-83 C09G12.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G12.10 C09G12.10 945   IV: 3504444-3504602

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G12.10.1 3504444 3506115 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117091   159   IV: 3504444-3504602 Caenorhabditis elegans
Exon117092   110   IV: 3504767-3504876 Caenorhabditis elegans
Exon117093   280   IV: 3504930-3505209 Caenorhabditis elegans
Exon117094   162   IV: 3505672-3505833 Caenorhabditis elegans
Exon117095   234   IV: 3505882-3506115 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G12.10.1 3504444 3506115 1

1 Sequence

Length
945

1 Sequence Ontology Term

Identifier Name Description
transcript