WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E11C.1b.1 Sequence Name  Y37E11C.1b.1
Length (nt)  2040   Chromosome Location  IV: 3518147-3525572
Chromosome . Primary Identifier  IV Chromosome Location . Start  3518147
Chromosome Location . End  3525572 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E11C.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006769 unc-33 Y37E11C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E11C.1b Y37E11C.1b 2040   IV: 3518147-3518165

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11C.1b.1 3518147 3525572 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117116   19   IV: 3518147-3518165 Caenorhabditis elegans
Exon117118   221   IV: 3518275-3518495 Caenorhabditis elegans
Exon117120   317   IV: 3519456-3519772 Caenorhabditis elegans
Exon117124   896   IV: 3522967-3523862 Caenorhabditis elegans
Exon117127   392   IV: 3524376-3524767 Caenorhabditis elegans
Exon117131   195   IV: 3525378-3525572 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11C.1b.1 3518147 3525572 1

1 Sequence

Length
2040

1 Sequence Ontology Term

Identifier Name Description
transcript