WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E11C.1a.1 Sequence Name  Y37E11C.1a.1
Length (nt)  3595   Chromosome Location  IV: 3516886-3526602
Chromosome . Primary Identifier  IV Chromosome Location . Start  3516886
Chromosome Location . End  3526602 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E11C.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006769 unc-33 Y37E11C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E11C.1a Y37E11C.1a 2565   IV: 3516886-3516926

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11C.1a.1 3516886 3526602 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117166   41   IV: 3516886-3516926 Caenorhabditis elegans
Exon117167   161   IV: 3516978-3517138 Caenorhabditis elegans
Exon117168   185   IV: 3517193-3517377 Caenorhabditis elegans
Exon117169   66   IV: 3517440-3517505 Caenorhabditis elegans
Exon117170   91   IV: 3518075-3518165 Caenorhabditis elegans
Exon117172   221   IV: 3518275-3518495 Caenorhabditis elegans
Exon117174   317   IV: 3519456-3519772 Caenorhabditis elegans
Exon117178   896   IV: 3522967-3523862 Caenorhabditis elegans
Exon117181   392   IV: 3524376-3524767 Caenorhabditis elegans
Exon117188   1225   IV: 3525378-3526602 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11C.1a.1 3516886 3526602 1

1 Sequence

Length
3595

1 Sequence Ontology Term

Identifier Name Description
transcript