WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0212.5.1 Sequence Name  B0212.5.1
Length (nt)  2875   Chromosome Location  IV: 3551090-3557431
Chromosome . Primary Identifier  IV Chromosome Location . Start  3551090
Chromosome Location . End  3557431 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0212.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003889 osm-9 B0212.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0212.5 B0212.5 2814   IV: 3551151-3551351

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0212.5.1 3551090 3557431 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117229   262   IV: 3551090-3551351 Caenorhabditis elegans
Exon117230   216   IV: 3551585-3551800 Caenorhabditis elegans
Exon117233   330   IV: 3552357-3552686 Caenorhabditis elegans
Exon117234   252   IV: 3553267-3553518 Caenorhabditis elegans
Exon117235   155   IV: 3553978-3554132 Caenorhabditis elegans
Exon117236   373   IV: 3554173-3554545 Caenorhabditis elegans
Exon117237   123   IV: 3554607-3554729 Caenorhabditis elegans
Exon117238   116   IV: 3554779-3554894 Caenorhabditis elegans
Exon117239   226   IV: 3555469-3555694 Caenorhabditis elegans
Exon117240   308   IV: 3555740-3556047 Caenorhabditis elegans
Exon117241   92   IV: 3556095-3556186 Caenorhabditis elegans
Exon117242   131   IV: 3556234-3556364 Caenorhabditis elegans
Exon117243   149   IV: 3556419-3556567 Caenorhabditis elegans
Exon117244   142   IV: 3557290-3557431 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0212.5.1 3551090 3557431 -1

1 Sequence

Length
2875

1 Sequence Ontology Term

Identifier Name Description
transcript