WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0212.1c Sequence Name  B0212.1c
Length (nt)  1896   Chromosome Location  IV: 3571100-3571114
Chromosome . Primary Identifier  IV Chromosome Location . Start  3571100
Chromosome Location . End  3571114
Paste the following link
Quick Links:
SummaryProteinsOther
 
Quick Links:
SummaryProteinsOther
 
Lists
This CDS isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0212.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48561 OTPL-1, isoform c 71.3 631 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00038723
WBRNAi00009576

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:B0212.1c 3571100 3571114 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015035 otpl-1 B0212.1 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier 		Start End Strand
CDS:B0212.1c 3571100 3571114 1
CDS:B0212.1c 3571381 3571437 1
CDS:B0212.1c 3571492 3571619 1
CDS:B0212.1c 3573556 3573679 1
CDS:B0212.1c 3573791 3573895 1
CDS:B0212.1c 3574079 3574217 1
CDS:B0212.1c 3574267 3574537 1
CDS:B0212.1c 3574993 3575168 1
CDS:B0212.1c 3575254 3575340 1
CDS:B0212.1c 3575515 3575714 1
CDS:B0212.1c 3576050 3576292 1
CDS:B0212.1c 3576883 3577057 1
CDS:B0212.1c 3577455 3577630 1

1 Sequence

Length
1896

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0212.1c.1 B0212.1c.1 2272   IV: 3570719-3577767