WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E11B.10a.1 Sequence Name  Y37E11B.10a.1
Length (nt)  1593   Chromosome Location  IV: 3603550-3605669
Chromosome . Primary Identifier  IV Chromosome Location . Start  3603550
Chromosome Location . End  3605669 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E11B.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021381 Y37E11B.10 Y37E11B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E11B.10a Y37E11B.10a 1536   IV: 3603580-3603735

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11B.10a.1 3603550 3605669 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117387   186   IV: 3603550-3603735 Caenorhabditis elegans
Exon117389   123   IV: 3603783-3603905 Caenorhabditis elegans
Exon117391   250   IV: 3603960-3604209 Caenorhabditis elegans
Exon117393   521   IV: 3604396-3604916 Caenorhabditis elegans
Exon117395   93   IV: 3604968-3605060 Caenorhabditis elegans
Exon117397   98   IV: 3605103-3605200 Caenorhabditis elegans
Exon117398   107   IV: 3605244-3605350 Caenorhabditis elegans
Exon117400   167   IV: 3605405-3605571 Caenorhabditis elegans
Exon117402   48   IV: 3605622-3605669 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11B.10a.1 3603550 3605669 -1

1 Sequence

Length
1593

1 Sequence Ontology Term

Identifier Name Description
transcript