WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E11B.10b.1 Sequence Name  Y37E11B.10b.1
Length (nt)  1790   Chromosome Location  IV: 3603580-3606466
Chromosome . Primary Identifier  IV Chromosome Location . Start  3603580
Chromosome Location . End  3606466 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E11B.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021381 Y37E11B.10 Y37E11B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E11B.10b Y37E11B.10b 1578   IV: 3603580-3603735

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11B.10b.1 3603580 3606466 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117388   156   IV: 3603580-3603735 Caenorhabditis elegans
Exon117390   123   IV: 3603783-3603905 Caenorhabditis elegans
Exon117392   250   IV: 3603960-3604209 Caenorhabditis elegans
Exon117394   521   IV: 3604396-3604916 Caenorhabditis elegans
Exon117396   233   IV: 3604968-3605200 Caenorhabditis elegans
Exon117399   107   IV: 3605244-3605350 Caenorhabditis elegans
Exon117401   167   IV: 3605405-3605571 Caenorhabditis elegans
Exon117403   52   IV: 3605622-3605673 Caenorhabditis elegans
Exon117404   97   IV: 3605904-3606000 Caenorhabditis elegans
Exon117405   84   IV: 3606383-3606466 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11B.10b.1 3603580 3606466 -1

1 Sequence

Length
1790

1 Sequence Ontology Term

Identifier Name Description
transcript