WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC416.4.1 Sequence Name  ZC416.4.1
Length (nt)  1229   Chromosome Location  IV: 3606784-3609229
Chromosome . Primary Identifier  IV Chromosome Location . Start  3606784
Chromosome Location . End  3609229 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC416.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002188 kgb-2 ZC416.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC416.4 ZC416.4 999   IV: 3606796-3606834

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC416.4.1 3606784 3609229 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117385   51   IV: 3606784-3606834 Caenorhabditis elegans
Exon117386   92   IV: 3606878-3606969 Caenorhabditis elegans
Exon117387   130   IV: 3607189-3607318 Caenorhabditis elegans
Exon117388   116   IV: 3607360-3607475 Caenorhabditis elegans
Exon117389   85   IV: 3607843-3607927 Caenorhabditis elegans
Exon117390   166   IV: 3607981-3608146 Caenorhabditis elegans
Exon117391   261   IV: 3608215-3608475 Caenorhabditis elegans
Exon117392   102   IV: 3608522-3608623 Caenorhabditis elegans
Exon117393   226   IV: 3609004-3609229 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC416.4.1 3606784 3609229 1

1 Sequence

Length
1229

1 Sequence Ontology Term

Identifier Name Description
transcript