WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC416.8b Sequence Name  ZC416.8b
Length (nt)  1884   Chromosome Location  IV: 3614054-3614410
Chromosome . Primary Identifier  IV Chromosome Location . Start  3614054
Chromosome Location . End  3614410
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC416.8b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17308 CHA-1, isoform b 71.3 627 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00001082
WBRNAi00027619
WBRNAi00102775

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZC416.8b 3614054 3614410 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000481 cha-1 ZC416.8 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZC416.8b 3614054 3614410 -1
CDS:ZC416.8b 3614654 3614852 -1
CDS:ZC416.8b 3614970 3615193 -1
CDS:ZC416.8b 3615458 3615699 -1
CDS:ZC416.8b 3615743 3615911 -1
CDS:ZC416.8b 3615956 3616232 -1
CDS:ZC416.8b 3616304 3616476 -1
CDS:ZC416.8b 3616520 3616661 -1
CDS:ZC416.8b 3617192 3617241 -1
CDS:ZC416.8b 3617725 3617775 -1

1 Sequence

Length
1884

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC416.8b.1 ZC416.8b.1 2073   IV: 3613931-3624697