WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC416.1.1 Sequence Name  ZC416.1.1
Length (nt)  1649   Chromosome Location  IV: 3637079-3640466
Chromosome . Primary Identifier  IV Chromosome Location . Start  3637079
Chromosome Location . End  3640466 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC416.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022608 madf-9 ZC416.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC416.1 ZC416.1 1002   IV: 3637080-3637169

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC416.1.1 3637079 3640466 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117427   91   IV: 3637079-3637169 Caenorhabditis elegans
Exon117428   184   IV: 3637218-3637401 Caenorhabditis elegans
Exon117429   142   IV: 3637449-3637590 Caenorhabditis elegans
Exon117430   363   IV: 3638285-3638647 Caenorhabditis elegans
Exon117431   869   IV: 3639598-3640466 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC416.1.1 3637079 3640466 1

1 Sequence

Length
1649

1 Sequence Ontology Term

Identifier Name Description
transcript